HG-class {AnnBuilder}R Documentation

Class "HG" a class to represent HomoloGene data source

Description

Objects of HG contains the url, build information, ... about the HomoloGene data that will be used to build a homolgy data package

Objects from the Class

Objects can be created by calls of the form new("GO", ...). A constructor (HG is available and should be used to instantiate objects of HG

Slots

srcUrl:
Object of class "character" a character string for the url or path of a source file to be used
parser:
Object of class "character" a character string for the name of a parser to be used to parse the source data. Not applicable to HG objects
baseFile:
Object of class "character" Not applicable to HG objects
built:
Object of class "character" a chracter string for the build information about the source file
fromWeb:
Object of class "logical" a boolean indicating whether srcUrl is a url to a source file or the path to a locally stored file

Extends

Class "pubRepo", directly.

Methods

readData
signature(object = "HG"): a function that reads the homoloGene data

Author(s)

Jianhua Zhang

References

http://www.ncbi.nlm. nih.gov/query?db = homology

See Also

pubRepo-class

Examples

  #No example is provided

[Package AnnBuilder version 1.4.21 Index]