sourceURLs {AnnBuilder}R Documentation

A data file contains urls for data available from various public repositories

Description

This data file is used by various objects (through getSrcUrl) to get the correct urls for various data sources to be processed.

Details

sourceURLs[[XX]] will get the url for data source XX, where XX is a short name for a particular public data repository. Valid names include "LL" - LocusLink, "UG" - UniGene, "GP" - GoldenPath, "GO" - Gene Ontology, "KEGG" - Kyoto Encyclopedia of Genes and Genomes, "GEO" - Gene Expression Omnibus, and "YG" - Yeast Genome.

Note

The data file part of the Bioconductor project at Dana-Farber Cancer Institute to provide Bioinformatics functionalities through R

Author(s)

Jianhua Zhang

See Also

pubRepo-class

Examples

load(file.path(.path.package("AnnBuilder"), "data", "sourceURLs.rda"),
.GlobalEnv)
sourceURLs[["KEGG"]]

[Package AnnBuilder version 1.4.21 Index]