cluster {GLAD}R Documentation

Optimal number of cluster

Description

The function cluster in an internal function which allows to find the optimal number of cluster in the data.

Usage

cluster.default(CGH, Cluster, region, labels, lambda, nmin, nmax, ...)

Arguments

CGH CGH
Cluster Cluster
labels labels
lambda Penalty λ*.
nmin Minimal number of cluster to find.
nmax Maximal number of cluster to find.
region Label which indicated where outliers are detected.
... Parameters to be passed to the kernelpen function.

Details

This function is called within findCluster.profileChr.

Author(s)

Philippe Hupé, Philippe.Hupe@curie.fr.

See Also

findCluster.profileChr


[Package GLAD version 1.0.1 Index]