KEGGENZYMEID2GO {KEGG}R Documentation

An annotation data file that maps Enzyme Commission numbers to Gene Ontology identifiers

Description

KEGGENZYMEID2GO maps Enzyme Commission numbers to Gene Ontoloty (GO) ids

Details

This is an environment object containing key and value pairs. Keys are Enzyme Commission numbers and values are GO ids. Values are vectors of length 1. Enzyme Commission numbers that can not be mapped to a GO term are assigned a value NA.

Mappings were based on data provided by:

KEGG:ftp://ftp.genome.ad.jp/pub/kegg/pathways/map_title.tab. Built: Release 31.0 (July 2004)

Package built: Fri Sep 17 16:18:11 2004

References

ftp://ftp.genome.ad.jp/pub/kegg/pathways

Examples

        require("annotate") || stop("annotate unavailable")
        xx <- as.list(KEGGENZYMEID2GO)
        if(length(xx) > 0){
                # Get the value of the first key
                xx[[1]]
                # Get values for a few keys
                if(length(xx) >= 3){
                        xx[1:3]
                }
        }

[Package KEGG version 1.6.5 Index]