KEGGPATHNAME2ID {KEGG}R Documentation

An annotation data file that maps KEGG pathway names to identifiers for the corresponding pathway names used by KEGG

Description

KEGGPATHNAME2ID maps KEGG pathway names to pathway ids used by KEGG for various pathways

Details

This is an environment object containing key and value pairs. Keys are KEGG pathway names and values are pathway ids. Values are vectors of length 1.

Mappings were based on data provided by:

KEGG:ftp://ftp.genome.ad.jp/pub/kegg/pathways/map_title.tab. Built: Release 31.0 (July 2004)

Package built: Fri Sep 17 16:18:11 2004

References

ftp://ftp.genome.ad.jp/pub/kegg/pathways

Examples

        require("annotate") || stop("annotate unavailable")
        xx <- as.list(KEGGPATHNAME2ID)
        if(length(xx) > 0){
                # get the value for the first key
                xx[[1]]
                # Get the values for a few keys
                if(length(xx) >= 3){
                        xx[1:3]
                }
        }

[Package KEGG version 1.6.5 Index]