writeMAGEML {RMAGEML}R Documentation

write MAGEML documents

Description

This function writes MAGEML documents from MAGE Object references.

Usage

writeMAGEML( mageOM = NULL, directory = ".", file = NULL)

Arguments

mageOM Reference to MAGE Object Model
directory Directory to which the MAGEML file should be written to
file Filename. Note should have extension xml e.g. update.xml

Author(s)

Steffen Durinck, http://www.esat.kuleuven.ac.be/~sdurinck
Joke Allemeersch, http://www.esat.kuleuven.ac.be/~jallemee.

References

Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr and Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046.

See Also

importMAGEOM,writeMAGEML,addDerivedData,addNormToMAGEML

Examples

#data<-system.file("MAGEMLdata", package="RMAGEML")
#mageom<-importMAGEOM(directory = data)
#writeMAGEML(mageOM = mageom, directory = ".", file = "updatedMAGEML.xml")

[Package RMAGEML version 2.1.0 Index]