barplot.ProbeSet {affy}R Documentation

show a ProbeSet as barplots

Description

displays the probe intensities in a ProbeSet as a barplots

Usage

barplot.ProbeSet(height, xlab = "Probe pair", ylab = "Intensity", main =
NA, col.pm = "red", col.mm = "blue", beside = TRUE, names.arg = "pp",
ask = TRUE, scale, ...)

Arguments

height an object of class ProbeSet
xlab label for x axis
ylab label for y axis
main main label for the figure
col.pm color for the `pm' intensities
col.mm color for the `mm' intensities
beside bars beside eachothers or not
names.arg
ask ask before ploting the next barplot
scale put all the barplot to the same scale
... extra parameters to be passed to barplot

Details

Examples

data(affybatch.example)
gn <- geneNames(affybatch.example)
pps <- probeset(affybatch.example, gn[1])[[1]]

barplot.ProbeSet(pps)

[Package affy version 1.8.1 Index]