aafCytoband-class {annaffy}R Documentation

Class aafCytoband, a class for cytoband data

Description

An abstraction for cytoband data from Bioconductor data packages.

Objects from the Class

Objects are generally created by the aafCytoband constructor. Objects can also be created manually by calls of the form new("aafCytoband", band, genbank).

Slots

band:
Object of class character containing genomic cytoband
genbank:
Object of class character containing containing GenBank accession number

Methods

getText
(aafCytoband): Returns text of band.
getURL
(aafCytoband): Returns a URL corresponding entry in NCBI's cytoband map viewer.

See generic implementations of getHTML, getTD, and getCSS.

Author(s)

Colin A. Smith, annaffy@colinsmith.org

See Also

aafCytoband


[Package annaffy version 1.2.0 Index]