aafPathway {annaffy}R Documentation

Constructor for aafPathway objects

Description

For the given probeids, constructs an aafList of aafPathway objects containing annotation data from the chip data package.

Usage

aafPathway(probeids, chip)

Arguments

probeids character vector containing probe ids
chip name of the chip data package

Value

An aafList of aafPathway objects. NA values are returned as empty objects.

Author(s)

Colin A. Smith, annaffy@colinsmith.org

See Also

aafPathway-class

Examples

if (require(hgu95av2)) {
    data(aafExpr)
    probes <- geneNames(aafExpr)
    pathways <- aafPathway(probes, "hgu95av2")
    show(pathways[6:10])
}

[Package annaffy version 1.2.0 Index]