gprDB {arrayQuality}R Documentation

Reference slides for Mouse oligos hybridizations

Description

MmReferenceDB, HsReferenceDB: quality matrix compiling results from a pool of good hybridization slides for Mouse and Human genomes respectively.

MmScalingTable, HsScalingTable: matrix of means and iqr calculated from the pool of good hybridization slides for Mouse and Human genomes respectively, for each quality measure. It is used to scale other arrays quality results.

index.html: HTML file used for quality report.

Source

These data were provided by members of the UCSF Shared functional genomics core lab.


[Package arrayQuality version 1.0.7 Index]