bim.effects |
Bayesian QTL map of loci and effects |

bim.fdr |
Bayesian False Discovery Rate for QTL mapping |

bim.model |
Bayesian model selection for number and pattern of QTL across genome |

bim.nqtl |
Bayesian model selection for number and pattern of QTL across genome |

bim.pattern |
Bayesian model selection for number and pattern of QTL across genome |

bim.qtl |
Bayesian QTL estimation and mapping of loci |

bmapqtl.options |
Options Settings for BmapQTL |

Bnapus |
Cross structure for complete Brassica napus data |

fisch |
Eight QTL Stephens and Fisch simulated data |

plot.bim |
Diagnostics plots for Bayesian interval mapping |

plot.bim.diag |
Marginal and model-conditional summaries of Bayesian interval
mapping diagnostics |

plot.bim.effects |
Bayesian QTL map of loci and effects |

plot.bim.fdr |
Bayesian False Discovery Rate for QTL mapping |

plot.bim.loci |
Jittered plot of Bayesian QTL loci samples by chromosome |

plot.bim.mcmc |
Bayesian MCMC sequence plots for burnin and iterations. |

plot.bim.model |
Graphical model assessment for Bayesian interval mapping |

plot.bim.qtl |
Bayesian QTL estimation and mapping of loci |

read.bim |
Read samples from WinQTL output |

read.bmapqtl |
Read and write options for WinQTL |

run.bmapqtl |
Run Bmapqtl reversible jump MCMC |

subset.bim |
Subsetting Bayesian interval mapping data |

summary.bim |
Summary of Bayesian interval mapping samples |

vern |
Eight week vernalization data for Brassica napus |

verngeo.bim |
Eight week vernalization data for Brassica napus |

vernpois.bim |
Eight week vernalization data for Brassica napus |

write.bmapqtl |
Read and write options for WinQTL |