R: Summary plots of mcmc objects

plot.mcmc {coda}

R Documentation

Summary plots of mcmc objects

plot.mcmc summarizes an mcmc or mcmc.list object with a trace of the sampled output and a density estimate for each variable in the chain.

## S3 method for class 'mcmc':
plot(x, trace = TRUE, density = TRUE, smooth = TRUE, bwf,
        auto.layout = TRUE, ask = TRUE, ...)

`x`	an object of class `mcmc` or `mcmc.list`
`trace`	Plot trace of each variable
`density`	Plot density estimate of each variable
`smooth`	Draw a smooth line through trace plots
`bwf`	Bandwidth function for density plots
`auto.layout`	Automatically generate output format
`ask`	Prompt user before each page of plots
`...`	Further arguments

Martyn Plummer