Meta-data and tools for E. coli


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Documentation for package `ecolitk' version 1.0-1

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arrowsArc Functions to plot circular related figures
chromPos2angle Functions to plot circular chromosomes informations
cPlotCircle Functions to plot circular chromosomes informations
ecoli.len Escherichia coli data
ecoli.m52.genome Escherichia coli data
ecoli.operon Escherichia coli data
ecoligenome.operon Known operon in E.coli - data.frame
ecoligenomeBNUM Environment for 'bnum' identifiers
ecoligenomeBNUM2ENZYME Environment for 'bnum' identifiers
ecoligenomeBNUM2GENBANK Environment for 'bnum' identifiers
ecoligenomeBNUM2GENEPRODUCT Environment for 'bnum' identifiers
ecoligenomeBNUM2GENETYPE Environment for 'bnum' identifiers
ecoligenomeBNUM2MULTIFUN Environment
ecoligenomeBNUM2STRAND Environment
ecoligenomeBNUM2SYMBOL Environment for 'bnum' identifiers
ecoligenomeCHRLOC Escherichia coli data
ecoligenomeMULTIFUN2GO multiFun classification
ecoligenomeSTRAND Escherichia coli data
ecoligenomeSYMBOL Escherichia coli data
ecoligenomeSYMBOL2AFFY Escherichia coli data
ecoligenomeSYMBOL2BNUM Environment for 'bnum' identifiers
gccontent function to compute gccontent
linesArc Functions to plot circular related figures
linesChrom Functions to plot circular chromosomes informations
linesCircle Functions to plot circular related figures
linkedmultiget A function to look for values across linked environments
multiFun multiFun classification
pointsArc Functions to plot circular related figures
polar2xy Functions to perform polar coordinate related functions
polygonArc Functions to plot circular related figures
polygonChrom Functions to plot circular chromosomes informations
polygonDisk Functions to plot circular related figures
rotate Functions to perform polar coordinate related functions
wstringapply Apply a function on a window sliding on a string
xy2polar Functions to perform polar coordinate related functions