Factorial designed microarray experiment analysis


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Documentation for package `factDesign' version 1.1.4

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contrastTest Construct appropriate lambda matrix and test linear contrasts of the parameter estimates from a linear model.
estrogen Microarray Data from an Experiment on Breast Cancer Cells
findFC A function to find the fold change between two experimental conditions in a factorial experiment based on the linear model parameter estimates.
kRepsOverA A filter function for at least k sets of replicates in a factorial experiment to have mean larger than A.
madOutPair Detect single outliers in experimental designs with only two replicates per treatment condition.
outlierPair Detect single outliers in experimental designs with only two replicates per treatment condition.
par2lambda Construct appropriate lambda matrix and test linear contrasts of the parameter estimates from a linear model.