Zscore.plot {genArise}R Documentation

Z-score Data Visualization: R vs I or M vs A

Description

This function allows to plot R-values vs I-values or M-values vs A-values for identifying differential expression.

Usage

Zscore.plot(dataSet.spot, Zscore.min, Zscore.max, all, col)

Arguments

dataSet.spot Spot Object
Zscore.min The lower value in a range, if Zscore.min = NULL then the file will contain all values bellow Zscore.max
Zscore.max The greater value in a range, if Zscore.max = NULL then file will be contain all values above Zscore.min. Both values, Zscore.min and Zscore.max can not be NULL
all
col Color in which the pioints of the plot will be shown where only the points from center are plot. This argument must be quoted and the possible values it can take are the same from the colors function in the R base package.

See Also

colors()

Examples

data(WT.dataset)
Zscore.plot(WT.dataset, Zscore.min = 1, Zscore.max = 2)

[Package genArise version 1.0.0 Index]