write.dataSet {genArise}R Documentation

Write dataSet

Description

Write the values for observations of an object of DataSet class in an output file. This values are writen in columns with the follow order: Cy3, Cy5, Cy3 Background, Cy5 Background, Ids and finally the Zscore value. By default this output file has no header.

Usage

write.dataSet(dataSet.spot, fileName, Zscore.min = NULL,
Zscore.max = NULL, sep = "\t")

Arguments

dataSet.spot An object of DataSet class
fileName The name of the output file where the data will be writen. This argument must be quoted.
Zscore.min The lower value in a range, if Zscore.min = NULL then the file will contain all values bellow Zscore.max
Zscore.max The greater value in a range, if Zscore.max = NULL then file will be contain all values above Zscore.min. Both values, Zscore.min and Zscore.max can not be NULL
sep Character to separate the columns in file. By default sep = "t".

Examples

data(WT.dataset)
write.dataSet(dataSet.spot = WT.dataset, fileName = "Example.csv",
Zscore.min = 1, Zscore.max = 1.5, sep = "\t")

[Package genArise version 1.0.0 Index]