TestResults-class {limma} | R Documentation |

## Matrix of Test Results - class

### Description

A matrix-based class for storing the results of simultanous tests.
`TestResults`

objects are normally created by `classifyTestsF`

, `classifyTestsT`

or `classifyTestsP`

.

### Usage

## S3 method for class 'TestResults':
summary(object, ...)

### Arguments

`object` |
object of class `TestResults` |

`...` |
other arguments are not used |

### Slots/List Components

`TestResults`

objects can be created by `new("TestResults",results)`

where `results`

is a matrix.
Objects of this class contain no slots (other than `.Data`

), although the attributes `dim`

and `dimnames`

may be treated as slots.

### Methods

This class inherits directly from class `matrix`

so any operation appropriate for matrices will work on objects of this class.
`show`

and `summary`

methods are also implemented.

Functions in LIMMA which operate on `TestResults`

objects include
`heatDiagram`

,
`vennCounts`

,
`vennDiagram`

,
`write.fit`

.

### Author(s)

Gordon Smyth

### See Also

02.Classes gives an overview of all the classes defined by this package.
08.Tests gives an overview of multiple testing.

### Examples

## Not run:
# Assume a data object MA and a design matrix
fit <- lmFit(MA, design)
fit <- eBayes(fit)
results <- decideTests(fit)
summary(results)
## End(Not run)

[Package

*limma* version 2.4.7

Index]